Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KCNMB1 | SEMA3A | ENSXETP00000010203 | ENSXETP00000010134 | Potassium calcium-activated channel subfamily M regulatory beta subunit 1. | Semaphorin 3A; Belongs to the semaphorin family. | 0.444 |
PLXND1 | SEMA3A | ENSXETP00000048732 | ENSXETP00000010134 | Plexin D1. | Semaphorin 3A; Belongs to the semaphorin family. | 0.509 |
PLXND1 | nrp1 | ENSXETP00000048732 | ENSXETP00000014777 | Plexin D1. | Neuropilin; Belongs to the neuropilin family. | 0.782 |
PLXND1 | nrp2 | ENSXETP00000048732 | ENSXETP00000052798 | Plexin D1. | Neuropilin; Belongs to the neuropilin family. | 0.586 |
SEMA3A | KCNMB1 | ENSXETP00000010134 | ENSXETP00000010203 | Semaphorin 3A; Belongs to the semaphorin family. | Potassium calcium-activated channel subfamily M regulatory beta subunit 1. | 0.444 |
SEMA3A | PLXND1 | ENSXETP00000010134 | ENSXETP00000048732 | Semaphorin 3A; Belongs to the semaphorin family. | Plexin D1. | 0.509 |
SEMA3A | SEMA5B | ENSXETP00000010134 | ENSXETP00000000358 | Semaphorin 3A; Belongs to the semaphorin family. | Semaphorin 5B. | 0.552 |
SEMA3A | nfatc4 | ENSXETP00000010134 | ENSXETP00000038372 | Semaphorin 3A; Belongs to the semaphorin family. | Nuclear factor of activated T cells 4. | 0.426 |
SEMA3A | nrp1 | ENSXETP00000010134 | ENSXETP00000014777 | Semaphorin 3A; Belongs to the semaphorin family. | Neuropilin; Belongs to the neuropilin family. | 0.791 |
SEMA3A | nrp2 | ENSXETP00000010134 | ENSXETP00000052798 | Semaphorin 3A; Belongs to the semaphorin family. | Neuropilin; Belongs to the neuropilin family. | 0.411 |
SEMA5B | SEMA3A | ENSXETP00000000358 | ENSXETP00000010134 | Semaphorin 5B. | Semaphorin 3A; Belongs to the semaphorin family. | 0.552 |
nfatc4 | SEMA3A | ENSXETP00000038372 | ENSXETP00000010134 | Nuclear factor of activated T cells 4. | Semaphorin 3A; Belongs to the semaphorin family. | 0.426 |
nfatc4 | nrp1 | ENSXETP00000038372 | ENSXETP00000014777 | Nuclear factor of activated T cells 4. | Neuropilin; Belongs to the neuropilin family. | 0.515 |
nfatc4 | nrp2 | ENSXETP00000038372 | ENSXETP00000052798 | Nuclear factor of activated T cells 4. | Neuropilin; Belongs to the neuropilin family. | 0.418 |
nrp1 | PLXND1 | ENSXETP00000014777 | ENSXETP00000048732 | Neuropilin; Belongs to the neuropilin family. | Plexin D1. | 0.782 |
nrp1 | SEMA3A | ENSXETP00000014777 | ENSXETP00000010134 | Neuropilin; Belongs to the neuropilin family. | Semaphorin 3A; Belongs to the semaphorin family. | 0.791 |
nrp1 | nfatc4 | ENSXETP00000014777 | ENSXETP00000038372 | Neuropilin; Belongs to the neuropilin family. | Nuclear factor of activated T cells 4. | 0.515 |
nrp1 | nrp2 | ENSXETP00000014777 | ENSXETP00000052798 | Neuropilin; Belongs to the neuropilin family. | Neuropilin; Belongs to the neuropilin family. | 0.539 |
nrp2 | PLXND1 | ENSXETP00000052798 | ENSXETP00000048732 | Neuropilin; Belongs to the neuropilin family. | Plexin D1. | 0.586 |
nrp2 | SEMA3A | ENSXETP00000052798 | ENSXETP00000010134 | Neuropilin; Belongs to the neuropilin family. | Semaphorin 3A; Belongs to the semaphorin family. | 0.411 |
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