STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pla2g16LRAT domain-containing protein. (157 aa)    
Predicted Functional Partners:
lcat
Family with sequence similarity 53 member C.
   
 
 0.909
pnpla6
Integrator complex subunit 2.
    
 0.909
mboat1
Potassium voltage-gated channel subfamily A member 4; Belongs to the membrane-bound acyltransferase family.
  
 
 0.909
lpcat1
Leucine-rich repeat LGI family member 2.
    
 0.906
lpcat2
Atypical chemokine receptor 4.
    
 0.904
gdpd1
Glucose-6-phosphate dehydrogenase.
     
 0.903
cept1
Choline/ethanolaminephosphotransferase 1; Catalyzes both phosphatidylcholine and phosphatidylethanolamine biosynthesis from CDP-choline and CDP- ethanolamine, respectively. Involved in protein-dependent process of phospholipid transport to distribute phosphatidyl choline to the lumenal surface (By similarity).
   
 
 0.903
chpt1
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.902
rarres3
LRAT domain-containing protein.
  
  
 
0.902
pisd
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
   
 
  0.901
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.