STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdcbp-2Uncharacterized protein. (537 aa)    
Predicted Functional Partners:
b4galt2
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
  
     0.494
LOC100498473
Toll-like receptor22.
  
     0.490
ENSXETP00000027140
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
     0.488
LOC101731906
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
     0.483
ENSXETP00000006086
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
     0.464
ENSXETP00000024495
Uncharacterized protein.
  
     0.454
etv2
Dachsous cadherin-related 2.
  
     0.446
ifnar2.1
Fibronectin type-III domain-containing protein.
  
     0.443
tmem126a-2
Uncharacterized protein.
  
     0.439
etv3l
ETS variant 3 like.
  
     0.437
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.