STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMILIN2Elastin microfibril interfacer 2. (1166 aa)    
Predicted Functional Partners:
itpk1
Inositol-tetrakisphosphate 1-kinase; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3. Belongs to the ITPK1 family.
    
  0.802
rps27a
Ribosomal protein S27a.
    
  0.566
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.566
tuba1a
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.539
arf5
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
  0.536
cryba1.2
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
    
  0.536
PALLD
Palladin, cytoskeletal associated protein.
    
  0.535
sez6l
Cullin 4B.
    
  0.525
tcof1
LisH domain-containing protein.
    
  0.517
met
UTP6 small subunit processome component.
    
  0.517
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.