STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erg28Uncharacterized protein. (301 aa)    
Predicted Functional Partners:
cyp51a1
DIRAS family GTP binding RAS like 3; Belongs to the cytochrome P450 family.
   
 
 0.982
hsd17b7
Uncharacterized protein.
   
 
 0.978
SC5D
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 
 0.976
sigmar1
Sigma non-opioid intracellular receptor 1; May function in lipid transport from the endoplasmic reticulum and be involved in a wide array of cellular functions probably through regulation of the biogenesis of lipid microdomains at the plasma membrane. May regulate calcium efflux at the endoplasmic reticulum (By similarity).
   
 
 0.970
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.970
pmt100124841
Methyltransf_11 domain-containing protein.
    
 
 0.969
fdft1
Ankyrin repeat and SOCS box containing 1.
   
 
 0.959
r3hdm4
R3H domain-containing protein.
   
 
 0.910
ndufaf6
Canopy FGF signaling regulator 2.
   
 
 0.871
dhcr7
7-dehydrocholesterol reductase; Production of cholesterol by reduction of C7-C8 double bond of 7-dehydrocholesterol (7-DHC).
   
 
 0.817
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.