STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trappc10Cyclic AMP-responsive element-binding protein 3-like protein 4. (1256 aa)    
Predicted Functional Partners:
trappc5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.997
trappc2l
Trafficking protein particle complex subunit 2-like protein; May play a role in vesicular transport from endoplasmic reticulum to Golgi; Belongs to the TRAPP small subunits family. Sedlin subfamily.
    
 0.994
trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.991
trappc2
Trafficking protein particle complex subunit 2; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.986
trappc9
ER membrane protein complex subunit 1.
   
 
 0.981
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.973
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.913
TRAPPC6B
Trafficking protein particle complex 6B.
    
 
 0.886
trappc6a
Uncharacterized protein.
    
 
 0.886
trappc13
Trafficking protein particle complex subunit 13.
     
 0.837
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.