STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
npffr2AAA domain-containing protein; Belongs to the AAA ATPase family. (842 aa)    
Predicted Functional Partners:
pex1
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
  
 
0.990
pex14
Pseudopodium-enriched atypical kinase 1.
    
 
 0.909
ubxn7
Succinate-CoA ligase, alpha subunit.
   
 
 0.825
pex5
TPR_REGION domain-containing protein.
   
 
 0.815
pex19
Uncharacterized protein.
    
 
 0.806
pex13
Integrin subunit beta like 1.
    
 
 0.806
pex10
Cholinergic receptor, nicotinic gamma.
   
 
 0.797
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.784
fam185a
DUF4097 domain-containing protein.
    
 
 0.760
NBR1
NBR1 autophagy cargo receptor.
   
 
 0.756
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.