STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100488559TPR_REGION domain-containing protein. (399 aa)    
Predicted Functional Partners:
tpi1
Triosephosphate isomerase; Triosephosphate isomerase is an extremely efficient metabolic enzyme that catalyzes the interconversion between dihydroxyacetone phosphate (DHAP) and D-glyceraldehyde-3-phosphate (G3P) in glycolysis and gluconeogenesis.
  
 0.938
rpl4
60S ribosomal protein L4; Belongs to the universal ribosomal protein uL4 family.
  
 
 0.937
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.914
grwd1
Zinc finger SWIM-type containing 5.
   
  
 0.868
gpi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.867
mycbpap
Kinesin-like protein KIF11.
  
 0.866
pgk1
Phosphoglycerate kinase.
  
 0.866
tarbp1
5-methyltetrahydrofolate-homocysteine methyltransferase.
   
 
  0.848
ENSXETP00000006464
Protein IWS1 homolog.
    
  0.817
KCNAB2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
  
 
 0.814
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.