STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uggt1Arrestin beta 1. (1555 aa)    
Predicted Functional Partners:
uggt2
Insulin like growth factor binding protein 5.
  
  
 
0.902
ganab
Twisted gastrulation BMP signaling modulator 1; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.673
mogs
U3 small nucleolar RNA-associated protein 15 homolog.
    
 
 0.624
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
 
 0.601
sec61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
      
 0.579
alg6
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
    
 
 0.559
stt3b
Rho guanine nucleotide exchange factor 25.
   
 
 0.555
stt3a
NOP2/Sun RNA methyltransferase 5.
   
 
 0.555
selenof
Glycerol-3-phosphate dehydrogenase 1.
    
 
 0.540
clgn
Transcription elongation factor A (SII), 3.
   
 
 0.537
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.