Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC100496911 | rcc1l | ENSXETP00000053542 | ENSXETP00000025015 | FBJ murine osteosarcoma viral oncogene homolog B. | Uncharacterized protein. | 0.470 |
ND4 | rcc1l | ENSXETP00000000011 | ENSXETP00000025015 | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | Uncharacterized protein. | 0.498 |
WHRN | pde6d | ENSXETP00000020253 | ENSXETP00000043757 | Whirlin. | Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...] | 0.530 |
WHRN | rcc1l | ENSXETP00000020253 | ENSXETP00000025015 | Whirlin. | Uncharacterized protein. | 0.478 |
WHRN | rpgrip1 | ENSXETP00000020253 | ENSXETP00000008891 | Whirlin. | Myelin regulatory factor. | 0.630 |
apob | rcc1l | ENSXETP00000024642 | ENSXETP00000025015 | Probable ATP-dependent RNA helicase ddx6. | Uncharacterized protein. | 0.608 |
lrpap1 | rcc1l | ENSXETP00000037802 | ENSXETP00000025015 | PC-esterase domain containing 1A. | Uncharacterized protein. | 0.595 |
lrpap1 | smim14 | ENSXETP00000037802 | ENSXETP00000003844 | PC-esterase domain containing 1A. | DNA primase subunit 2. | 0.604 |
nme6 | rcc1l | ENSXETP00000038638 | ENSXETP00000025015 | Nucleoside diphosphate kinase 6; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Uncharacterized protein. | 0.484 |
npm1 | rcc1l | ENSXETP00000049002 | ENSXETP00000025015 | Nucleophosmin (Nucleolar phosphoprotein B23, numatrin). | Uncharacterized protein. | 0.471 |
pde6d | WHRN | ENSXETP00000043757 | ENSXETP00000020253 | Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...] | Whirlin. | 0.530 |
pde6d | rcc1l | ENSXETP00000043757 | ENSXETP00000025015 | Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...] | Uncharacterized protein. | 0.665 |
pde6d | rpgrip1 | ENSXETP00000043757 | ENSXETP00000008891 | Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...] | Myelin regulatory factor. | 0.587 |
rcc1l | LOC100496911 | ENSXETP00000025015 | ENSXETP00000053542 | Uncharacterized protein. | FBJ murine osteosarcoma viral oncogene homolog B. | 0.470 |
rcc1l | ND4 | ENSXETP00000025015 | ENSXETP00000000011 | Uncharacterized protein. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.498 |
rcc1l | WHRN | ENSXETP00000025015 | ENSXETP00000020253 | Uncharacterized protein. | Whirlin. | 0.478 |
rcc1l | apob | ENSXETP00000025015 | ENSXETP00000024642 | Uncharacterized protein. | Probable ATP-dependent RNA helicase ddx6. | 0.608 |
rcc1l | lrpap1 | ENSXETP00000025015 | ENSXETP00000037802 | Uncharacterized protein. | PC-esterase domain containing 1A. | 0.595 |
rcc1l | nme6 | ENSXETP00000025015 | ENSXETP00000038638 | Uncharacterized protein. | Nucleoside diphosphate kinase 6; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.484 |
rcc1l | npm1 | ENSXETP00000025015 | ENSXETP00000049002 | Uncharacterized protein. | Nucleophosmin (Nucleolar phosphoprotein B23, numatrin). | 0.471 |
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