STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
akirin2Zinc finger and BTB domain-containing 12. (181 aa)    
Predicted Functional Partners:
psma5
Proteasome subunit alpha type.
    
   0.849
psma2
Proteasome subunit alpha type.
    
   0.816
psma4
Proteasome subunit alpha type.
    
   0.802
psma6
Proteasome subunit alpha type.
    
   0.802
psmb2
Proteasome subunit beta.
    
   0.789
psmb3
Uncharacterized protein.
    
   0.776
psma7
Proteasome subunit alpha type.
    
   0.694
psmb5
Proteasome subunit beta.
    
   0.628
psmb6
Uncharacterized protein.
    
   0.628
psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
   0.628
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.