Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
celsr2 | gata1 | ENSXETP00000035368 | ENSXETP00000009610 | Immunoglobin superfamily member 21; Belongs to the G-protein coupled receptor 2 family. | GATA-binding protein 1. | 0.800 |
celsr2 | vangl2 | ENSXETP00000035368 | ENSXETP00000045917 | Immunoglobin superfamily member 21; Belongs to the G-protein coupled receptor 2 family. | Vang-like protein 2; Has a role in non-canonical Wnt/planar cell polarity (PCP) signaling; can recruite dvl/dsh and prickle from the cytoplasm to the plasma membrane. Acts in a PCP complex to regulate the polarized assembly of fibronectrin on the surface of the mesoderm during gastrulation. Regulates convergent extension in both dorsal mesoderm and neural tissue without affecting cell fate. Regulates neural fold closure during neurulation. May be required for cell surface localization of fzd3 and fzd6 in the inner ear (By similarity). | 0.488 |
gata1 | celsr2 | ENSXETP00000009610 | ENSXETP00000035368 | GATA-binding protein 1. | Immunoglobin superfamily member 21; Belongs to the G-protein coupled receptor 2 family. | 0.800 |
vangl2 | celsr2 | ENSXETP00000045917 | ENSXETP00000035368 | Vang-like protein 2; Has a role in non-canonical Wnt/planar cell polarity (PCP) signaling; can recruite dvl/dsh and prickle from the cytoplasm to the plasma membrane. Acts in a PCP complex to regulate the polarized assembly of fibronectrin on the surface of the mesoderm during gastrulation. Regulates convergent extension in both dorsal mesoderm and neural tissue without affecting cell fate. Regulates neural fold closure during neurulation. May be required for cell surface localization of fzd3 and fzd6 in the inner ear (By similarity). | Immunoglobin superfamily member 21; Belongs to the G-protein coupled receptor 2 family. | 0.488 |