Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
arhgef7 | schip1 | ENSXETP00000028702 | ENSXETP00000035444 | Rho guanine nucleotide exchange factor 7; Belongs to the peptidase S1 family. | Protein arginine methyltransferase 3. | 0.569 |
gpm6a | schip1 | ENSXETP00000013590 | ENSXETP00000035444 | Glycoprotein M6A. | Protein arginine methyltransferase 3. | 0.445 |
heatr5a | schip1 | ENSXETP00000053459 | ENSXETP00000035444 | HEAT repeat-containing protein 5A; Belongs to the HEATR5 family. | Protein arginine methyltransferase 3. | 0.499 |
schip1 | arhgef7 | ENSXETP00000035444 | ENSXETP00000028702 | Protein arginine methyltransferase 3. | Rho guanine nucleotide exchange factor 7; Belongs to the peptidase S1 family. | 0.569 |
schip1 | gpm6a | ENSXETP00000035444 | ENSXETP00000013590 | Protein arginine methyltransferase 3. | Glycoprotein M6A. | 0.445 |
schip1 | heatr5a | ENSXETP00000035444 | ENSXETP00000053459 | Protein arginine methyltransferase 3. | HEAT repeat-containing protein 5A; Belongs to the HEATR5 family. | 0.499 |
schip1 | zfand5 | ENSXETP00000035444 | ENSXETP00000011788 | Protein arginine methyltransferase 3. | High mobility group protein 20A. | 0.630 |
zfand5 | schip1 | ENSXETP00000011788 | ENSXETP00000035444 | High mobility group protein 20A. | Protein arginine methyltransferase 3. | 0.630 |