STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfdSerine protease ami; Probable serine protease; Belongs to the peptidase S1 family. (266 aa)    
Predicted Functional Partners:
hbg1
Hemoglobin subunit beta-1; Involved in oxygen transport from the lung to the various peripheral tissues.
    
  0.453
ahsg
Alpha-2-HS-glycoprotein.
   
 0.452
fn1
Fibronectin 1.
    
  0.442
myom1
NIPA-like domain containing 4.
    
  0.431
rabgef1
SET nuclear proto-oncogene.
    
  0.425
plac8l1
Novel protein similar to cornifelin.
    
 
 0.424
dpep2
Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.
   
  
 0.423
pgam1
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
    
  0.414
LOC100496716
Uncharacterized protein.
      
 0.414
dpep1
Solute carrier family 25 member 43.
   
 
  0.413
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.