STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sin3bHDAC_interact domain-containing protein. (1127 aa)    
Predicted Functional Partners:
arid4b
Transmembrane protein 87A.
    
 
 0.995
arid4a
Tumor protein p53 inducible protein 3.
    
 
 0.995
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
   
 
 0.905
phf12
Uncharacterized protein.
   
 
 0.887
morf4l1
Component of oligomeric golgi complex 3.
   
 
 0.867
ing1
Inhibitor of growth protein.
   
 
 0.836
brms1l
Breast cancer metastasis-suppressor 1-like protein; Involved in the histone deacetylase (HDAC1)-dependent transcriptional repression activity; Belongs to the BRMS1 family.
   
 
 0.725
EMSY
EMSY transcriptional repressor, BRCA2 interacting.
    
 
 0.713
mecp2
Kruppel-like factor 17.
    
 
 0.711
rbbp7
Histone-binding protein RBBP7; Core histone-binding subunit that may target chromatin remodeling factors, histone acetyltransferases and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA.
   
 
 0.700
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.