STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
calrCalreticulin. (447 aa)    
Predicted Functional Partners:
pdia3
Protein disulfide-isomerase.
   
 0.982
tapbp
Ribosomal protein S6 kinase, 90kDa, polypeptide 4.
    
 0.977
hsp90b1
Heat shock protein 90kDa beta (Grp94), member 1.
   
 
 0.945
tap2
Germ cell-less, spermatogenesis associated 1.
   
 0.920
LOC100127707
Ig-like domain-containing protein; Belongs to the MHC class I family.
    
 0.919
gstp1-2
Ig-like domain-containing protein; Belongs to the MHC class I family.
    
  0.915
LOC100494735
Cytochrome P450 2C31-like.
   
 0.914
bckdhb-2
Calreticulin.
  
  
 
0.902
slc25a53
Solute carrier family 25 member 53; Belongs to the MHC class I family.
     
  0.900
hspa5
Neuronal vesicle trafficking associated 1; Belongs to the heat shock protein 70 family.
   
 
 0.846
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.