STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bhlhe40ADAMTS like 4. (226 aa)    
Predicted Functional Partners:
arntl
Sin3A associated protein 18kDa.
    
 
 0.658
fbxo32-2
Sorting nexin-31.
   
 
 0.648
nfil3
Nuclear factor interleukin-3-regulated protein; May act as a transcriptional regulator of a number of proteins of the circadian clock.
    
 
 0.609
nr1d1
Heparan sulfate 6-O-sulfotransferase 3.
      
 0.598
psmb2
Proteasome subunit beta.
      
 0.596
rorb
Radial spoke head protein 9 homolog.
    
 
 0.528
CRY2
Cryptochrome circadian regulator 2.
   
 
 0.508
thibz
Choroideremia (Rab escort protein 1).
    
 
 0.468
setmar
Solute carrier family 26 (anion exchanger), member 11.
    
 
 0.467
cry1
Forkhead box protein F1.
   
 
 0.437
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.