STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psap-2Prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy). (257 aa)    
Predicted Functional Partners:
scel
Synovial sarcoma translocation, chromosome 18.
   
  
 0.584
mgat5b
Uncharacterized protein.
      
 0.535
fat2
Inner centromere protein.
      
 0.518
abcd4
Ankyrin repeat and sterile alpha motif domain containing 6.
      
 0.513
adgrg6
Glycosyltransferase-like domain-containing protein 1.
      
 0.468
tfap2c
Transcription factor AP-2 gamma (Activating enhancer binding protein 2 gamma).
      
 0.460
rgcc
Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting), gene 2.
      
 0.459
LOC100488718
Growth arrest specific 6; Belongs to the G-protein coupled receptor 1 family.
      
 0.459
rcan1
Uncharacterized LOC100145533.
      
 0.457
inka1
FAM212 domain-containing protein.
      
 0.457
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.