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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cratCarn_acyltransf domain-containing protein. (631 aa)    
Predicted Functional Partners:
crata
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
  
  
 
0.903
HTD2
Hydroxyacyl-thioester dehydratase type 2.
   
 
 0.746
dhrs4
Uncharacterized protein.
   
 
 0.604
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.598
slc25a20l
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.577
slc25a20
Carnitine/acylcarnitine translocase; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.577
idh1
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
  
 0.567
cs
Citrate synthase, mitochondrial.
   
 
 0.566
hao2
FMN hydroxy acid dehydrogenase domain-containing protein.
   
  
 0.561
hao1
FMN hydroxy acid dehydrogenase domain-containing protein.
   
  
 0.561
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.