STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rock2Mediator of RNA polymerase II transcription subunit 18; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1461 aa)    
Predicted Functional Partners:
rhoa.2
Nuclear receptor binding SET domain protein 3.
   
 0.955
rhoa
Ras homolog gene family, member A.
   
 0.955
rhoc
Calponin 3, acidic.
   
 0.955
myl9
LOC100124811 protein.
    
 0.934
myl12b
Uncharacterized protein.
    
 0.934
limk2
Exocyst complex component 6.
    
0.926
myl2
Adaptor related protein complex 5 subunit zeta 1.
    
 0.925
ppp1r12b
PRKG1_interact domain-containing protein.
   
 0.925
myl10
LOC100170437 protein.
    
 0.925
LOC100487727
Protein phosphatase 1 regulatory subunit.
   
 0.924
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.