STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
il13ra1Cleavage stimulation factor, 3' pre-RNA, subunit 1. (357 aa)    
Predicted Functional Partners:
il4r
Mesenteric estrogen-dependent adipogenesis.
    
 
 0.956
rraga
Leucyl-tRNA synthetase 2.
    
 
 0.744
ctns
Kelch like family member 24.
      
 0.727
il13ra2
Tetratricopeptide repeat domain 16.
  
   
0.681
dr1
Down-regulator of transcription 1, TBP-binding (Negative cofactor 2).
      
 0.550
btg5.1
Novel protein similar to BTG family, member 3 btg3.
      
 0.512
btg3
Potassium channel, voltage gated KQT-like subfamily Q, member 1.
      
 0.512
nlgn3-2
Fibronectin type-III domain-containing protein.
  
   
 0.511
ifngr1
Uncharacterized protein.
  
  
 0.498
il10rb
Fibronectin type-III domain-containing protein.
  
  
 0.459
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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