Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCLK2 | calm2 | ENSXETP00000042789 | ENSXETP00000002778 | Doublecortin like kinase 2. | Calmodulin 1 (Phosphorylase kinase, delta); Belongs to the calmodulin family. | 0.435 |
DCLK2 | scn2a | ENSXETP00000042789 | ENSXETP00000051560 | Doublecortin like kinase 2. | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | 0.900 |
SCN1B | scn2a | ENSXETP00000005534 | ENSXETP00000051560 | Sodium voltage-gated channel beta subunit 1. | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | 0.631 |
SCN1B | scn2b | ENSXETP00000005534 | ENSXETP00000027471 | Sodium voltage-gated channel beta subunit 1. | Period circadian regulator 1. | 0.937 |
SLC9A5 | rps27a | ENSXETP00000028932 | ENSXETP00000003885 | Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. | Ribosomal protein S27a. | 0.499 |
SLC9A5 | scn2a | ENSXETP00000028932 | ENSXETP00000051560 | Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | 0.514 |
SLC9A5 | slc35d3 | ENSXETP00000028932 | ENSXETP00000005306 | Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. | Hexosyltransferase. | 0.503 |
SLC9A5 | uba52 | ENSXETP00000028932 | ENSXETP00000008691 | Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.499 |
UNC79 | scn2a | ENSXETP00000045942 | ENSXETP00000051560 | Unc-79 homolog, NALCN channel complex subunit. | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | 0.837 |
abraxas1-2 | rps27a | ENSXETP00000034730 | ENSXETP00000003885 | BRCA1-A complex subunit Abraxas 1. | Ribosomal protein S27a. | 0.782 |
abraxas1-2 | scn2a | ENSXETP00000034730 | ENSXETP00000051560 | BRCA1-A complex subunit Abraxas 1. | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | 0.700 |
abraxas1-2 | uba52 | ENSXETP00000034730 | ENSXETP00000008691 | BRCA1-A complex subunit Abraxas 1. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.782 |
calm2 | DCLK2 | ENSXETP00000002778 | ENSXETP00000042789 | Calmodulin 1 (Phosphorylase kinase, delta); Belongs to the calmodulin family. | Doublecortin like kinase 2. | 0.435 |
calm2 | scn2a | ENSXETP00000002778 | ENSXETP00000051560 | Calmodulin 1 (Phosphorylase kinase, delta); Belongs to the calmodulin family. | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | 0.508 |
rps27a | SLC9A5 | ENSXETP00000003885 | ENSXETP00000028932 | Ribosomal protein S27a. | Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. | 0.499 |
rps27a | abraxas1-2 | ENSXETP00000003885 | ENSXETP00000034730 | Ribosomal protein S27a. | BRCA1-A complex subunit Abraxas 1. | 0.782 |
rps27a | scn2a | ENSXETP00000003885 | ENSXETP00000051560 | Ribosomal protein S27a. | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | 0.700 |
rps27a | slc35d3 | ENSXETP00000003885 | ENSXETP00000005306 | Ribosomal protein S27a. | Hexosyltransferase. | 0.499 |
rps27a | uba52 | ENSXETP00000003885 | ENSXETP00000008691 | Ribosomal protein S27a. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.999 |
scn2a | DCLK2 | ENSXETP00000051560 | ENSXETP00000042789 | Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. | Doublecortin like kinase 2. | 0.900 |
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