STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btdFA complementation group C. (507 aa)    
Predicted Functional Partners:
hlcs
Engrailed homeobox 2.
    
 0.963
aass
NIN1 (RPN12) binding protein 1 homolog.
  
 
 0.814
pc.2
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
      
 0.571
bcat2
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.549
QPRT
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
  
 
 0.510
srm
Huntingtin interacting protein K; Belongs to the spermidine/spermine synthase family.
  
 
 0.492
sms
PABS domain-containing protein.
  
 
 0.492
agxt2
Recoverin, gene 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.490
abat
LOC100158654 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.490
etnppl
MYCL proto-oncogene, bHLH transcription factor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.490
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.