STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM96296.1PAS domain S-box-containing protein. (150 aa)    
Predicted Functional Partners:
SFN35691.1
PAS domain S-box-containing protein.
 
     0.912
SFN05770.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
     0.898
SFN57547.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
     0.879
SFM96357.1
Signal transduction histidine kinase.
     0.866
SFM95172.1
Signal transduction histidine kinase.
 
      0.854
SFN13536.1
PAS domain S-box-containing protein.
 
     0.821
SFM96273.1
Diguanylate cyclase (GGDEF) domain-containing protein.
      0.806
SFN35719.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
     0.774
SFM96384.1
Hpt domain-containing protein.
     0.700
SFN57598.1
PAS domain S-box-containing protein.
 
     0.700
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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