STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM97914.1Two-component system, LytT family, sensor kinase. (562 aa)    
Predicted Functional Partners:
SFM97942.1
Two component transcriptional regulator, LytTR family.
 0.992
SFN48044.1
Two component transcriptional regulator, LytTR family.
 0.960
SFN34666.1
PAS domain S-box-containing protein.
   
 
 0.805
SFN48069.1
Two-component system, LytT family, sensor histidine kinase AlgZ.
 
  
0.696
SFN85317.1
Two-component system, CitB family, cit operon sensor histidine kinase CitA.
  
   
 0.666
SFM97974.1
Carbon starvation protein.
 
   
 0.642
SFN33109.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
 
 0.629
SFN88635.1
Two-component system, chemotaxis family, response regulator CheY.
  
 
 0.628
SFN85359.1
Two-component system, CitB family, response regulator CitB.
  
     0.571
SFN57598.1
PAS domain S-box-containing protein.
     
 0.558
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.