STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN03869.1Amino acid ABC transporter ATP-binding protein, PAAT family. (255 aa)    
Predicted Functional Partners:
SFN03851.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.999
SFN29467.1
Glutamate/aspartate transport system permease protein.
 0.988
SFM94434.1
Polar amino acid transport system permease protein.
 0.982
SFN29488.1
Glutamate/aspartate transport system permease protein.
 0.977
SFN03832.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.957
SFM94460.1
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.918
SFN34212.1
Putative ABC transport system permease protein.
 
      0.899
SFN56797.1
Putative ABC transport system permease protein.
 
      0.897
SFN35739.1
Microcin C transport system permease protein.
 
      0.844
msbA
ATP-binding cassette, subfamily B, MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
    
0.840
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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