STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN18464.1Hypothetical protein. (503 aa)    
Predicted Functional Partners:
SFN61960.1
Tetratricopeptide repeat-containing protein.
  
 0.851
SFN18445.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
 
    0.810
SFN18402.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.786
SFN18422.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
       0.779
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.772
SFN18738.1
Pilus assembly protein CpaE.
 
     0.696
SFN18806.1
Tight adherence protein C.
 
     0.687
SFN18558.1
Hypothetical protein.
 
     0.685
SFN18580.1
Pilus assembly protein CpaB.
 
     0.682
SFN18782.1
Tight adherence protein B.
 
     0.668
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.