STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN27712.1Type IV pilus assembly protein PilO. (208 aa)    
Predicted Functional Partners:
SFN27682.1
Type IV pilus assembly protein PilN.
 
 
 0.999
SFN27740.1
Type IV pilus assembly protein PilP.
 
 
 0.997
SFN27648.1
Type IV pilus assembly protein PilM.
 
 
 0.996
SFN27770.1
Type IV pilus assembly protein PilQ.
 
 
 0.994
SFN29362.1
LysM domain-containing protein.
 
 
   0.953
SFM97596.1
Pilus assembly protein FimV.
  
  
 0.839
SFN49076.1
Type IV pilus assembly protein PilY1.
 
  
 0.832
SFN52124.1
Type IV pilus assembly protein PilC.
 
 
 
 0.826
SFN23383.1
Type IV pilus assembly protein PilZ.
  
   
 0.801
SFN23143.1
Type IV pilus assembly protein PilF.
  
   
 0.796
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.