STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN28542.1Hypothetical protein. (785 aa)    
Predicted Functional Partners:
SFN33109.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.998
SFN34666.1
PAS domain S-box-containing protein.
 
0.996
SFM96357.1
Signal transduction histidine kinase.
 
0.995
SFN35691.1
PAS domain S-box-containing protein.
 
0.994
SFN40377.1
Predicted ATPase.
0.994
SFN28516.1
Two-component system, LuxR family, response regulator DctR.
 0.992
SFN37728.1
PAS domain S-box-containing protein.
 
0.991
SFM95172.1
Signal transduction histidine kinase.
 
 
0.990
SFN21603.1
PAS domain S-box-containing protein.
 
 
0.990
SFM96273.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.988
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.