STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN34148.1HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (406 aa)    
Predicted Functional Partners:
SFN34212.1
Putative ABC transport system permease protein.
 
 0.988
SFN34117.1
Outer membrane protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
 
 0.984
SFN34181.1
Putative ABC transport system ATP-binding protein.
 
 0.978
SFN56797.1
Putative ABC transport system permease protein.
 
 0.952
SFN56832.1
Putative ABC transport system ATP-binding protein.
 
 0.918
SFM95704.1
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
 0.872
SFN69645.1
Multidrug efflux pump.
 0.870
SFN79273.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.860
SFM96046.1
Cu(I)/Ag(I) efflux system membrane protein CusA/SilA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.844
SFN56554.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.839
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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