STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN47754.1Uncharacterized membrane protein SpoIIM, required for sporulation. (316 aa)    
Predicted Functional Partners:
SFN47785.1
Uncharacterized membrane protein YckC, RDD family.
    0.980
SFN47701.1
Hypothetical protein.
 
    0.964
SFN47731.1
Protein of unknown function.
 
    0.964
SFN47643.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.902
SFN47812.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.873
SFN47672.1
MoxR-like ATPase.
 
    0.863
SFN39145.1
Helix-turn-helix.
  
     0.532
SFN34921.1
Spore maturation protein B.
   
  
 0.530
SFN47475.1
SPFH domain / Band 7 family protein.
  
     0.499
SFN13915.1
Uncharacterized membrane protein.
  
     0.463
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.