STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN48719.1Nucleoside 2-deoxyribosyltransferase. (187 aa)    
Predicted Functional Partners:
parE
Topoisomerase-4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.
     
 0.781
parC
Topoisomerase-4 subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
       0.773
SFN48653.1
Mg chelatase-related protein.
       0.566
SFN75599.1
Dienelactone hydrolase.
  
     0.534
SFN05695.1
5'-nucleotidase / UDP-sugar diphosphatase; Belongs to the 5'-nucleotidase family.
    
  0.531
SFN34422.1
Uncharacterized protein.
 
     0.490
SFN59957.1
Protein of unknown function; Belongs to the UPF0250 family.
  
     0.477
SFN02384.1
Hypothetical protein.
  
     0.457
SFN29166.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.