STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN48932.1Type IV pilus assembly protein PilE. (134 aa)    
Predicted Functional Partners:
SFN48964.1
Type IV fimbrial biogenesis protein FimT.
 
  
 0.969
SFN49076.1
Type IV pilus assembly protein PilY1.
 
  
 0.906
SFN27648.1
Type IV pilus assembly protein PilM.
 
   
 0.803
SFN27770.1
Type IV pilus assembly protein PilQ.
 
   
 0.797
SFN27682.1
Type IV pilus assembly protein PilN.
 
  
 0.793
SFN48997.1
Type IV pilus assembly protein PilW.
  
  
 0.777
SFN27712.1
Type IV pilus assembly protein PilO.
 
   
 0.776
SFN49034.1
Tfp pilus assembly protein PilX.
  
  
 0.764
SFN06972.1
N-terminal methylation site-containing protein.
 
  
0.670
SFN27740.1
Type IV pilus assembly protein PilP.
  
  
 0.665
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.