STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN54887.1Uncharacterized protein involved in outer membrane biogenesis. (746 aa)    
Predicted Functional Partners:
SFN54910.1
A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs.
  
    0.799
SFN02384.1
Hypothetical protein.
  
     0.762
SFN78383.1
Hypothetical protein.
  
     0.760
SFN16252.1
Uncharacterized conserved protein YdgA, DUF945 family.
  
     0.752
SFN82395.1
O-antigen ligase.
  
    0.752
SFN16419.1
Protein of unknown function.
  
    0.749
SFN29166.1
Hypothetical protein.
  
     0.744
SFN29220.1
Tetratricopeptide repeat-containing protein.
  
     0.723
SFN77792.1
PAS domain S-box-containing protein.
 
     0.660
SFN04453.1
Hypothetical protein.
 
     0.650
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.