STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN57627.1HD domain-containing protein. (419 aa)    
Predicted Functional Partners:
SFM94915.1
Adenylate cyclase.
 
 
  0.858
SFN40377.1
Predicted ATPase.
  
 
 0.787
SFN57901.1
GAF domain-containing protein.
 
    0.779
SFM93667.1
HD domain-containing protein.
  
     0.775
SFN57279.1
Metal dependent phosphohydrolase.
  
     0.775
SFN57876.1
NADH oxidoreductase Hcr.
     
 0.706
SFN84815.1
Adenylate cyclase.
    
  0.682
SFN03583.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.679
SFN24630.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.618
SFN57732.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.614
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
Server load: low (14%) [HD]