STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN64855.1Iron complex outermembrane recepter protein. (671 aa)    
Predicted Functional Partners:
SFN64823.1
Protein of unknown function.
 
     0.865
SFN49807.1
Protein TonB.
 
 
 
 0.847
SFN49413.1
Protein TonB.
   
 
 0.806
SFN88778.1
Outer membrane transport energization protein TonB.
   
 
 0.806
SFN64792.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.773
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 
 0.676
SFN19127.1
Chromosome partitioning protein.
    
 
 0.672
SFN62486.1
Chromosome partitioning protein.
    
 
 0.672
SFN74096.1
Chromosome partitioning protein.
    
 
 0.672
SFN87892.1
Chromosome partitioning protein.
    
 
 0.672
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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