STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN65006.1ABC-type uncharacterized transport system, auxiliary component. (200 aa)    
Predicted Functional Partners:
SFN65040.1
Paraquat-inducible protein B.
       0.792
SFN65075.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
       0.782
SFN65105.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
       0.776
SFN65140.1
Flagellar biosynthesis protein FlhG.
       0.768
SFN65176.1
Flagellar biosynthesis protein FlhF.
       0.768
fliA
RNA polymerase sigma factor for flagellar operon FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
       0.519
SFN65211.1
MFS transporter, FSR family, fosmidomycin resistance protein.
       0.501
SFN64899.1
Hypothetical protein.
       0.478
SFN64933.1
Chemotaxis protein MotA.
       0.478
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.