STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN87614.1HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (396 aa)    
Predicted Functional Partners:
SFN87543.1
Putative ABC transport system ATP-binding protein.
 
 
 0.981
SFN87576.1
Putative ABC transport system permease protein.
 
 
 0.954
SFN87663.1
Transcriptional regulator, TetR family.
 
   
 0.948
SFN69645.1
Multidrug efflux pump.
 
 0.874
SFM95704.1
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
 
 0.871
SFN79273.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.858
SFM96046.1
Cu(I)/Ag(I) efflux system membrane protein CusA/SilA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.843
SFN56554.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.834
SFN56797.1
Putative ABC transport system permease protein.
 
 
 0.822
SFN56906.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.817
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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