STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN87739.1Formylmethanofuran dehydrogenase subunit E. (206 aa)    
Predicted Functional Partners:
SFN87702.1
Cupin domain protein.
       0.779
SFN87576.1
Putative ABC transport system permease protein.
 
     0.548
SFN87663.1
Transcriptional regulator, TetR family.
 
     0.535
SFN87614.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.529
SFN12154.1
SpoIIAA-like.
  
     0.514
SFN56969.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.513
SFO00547.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.513
SFN03233.1
Acetolactate synthase, large subunit.
    
  0.512
SFN58162.1
tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA.
    
  0.503
SFN87543.1
Putative ABC transport system ATP-binding protein.
 
     0.498
Your Current Organism:
Formivibrio citricus
NCBI taxonomy Id: 83765
Other names: ATCC 49791, DSM 6150, F. citricus, strain CreCit1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.