Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG62505.1 | SDG69052.1 | SAMN05660652_00283 | SAMN05660652_00460 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | HNH endonuclease. | 0.759 |
SDG62505.1 | folD | SAMN05660652_00283 | SAMN05660652_04032 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.812 |
SDG62505.1 | purN | SAMN05660652_00283 | SAMN05660652_02820 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.900 |
SDG69014.1 | SDG69052.1 | SAMN05660652_00459 | SAMN05660652_00460 | Permease of the drug/metabolite transporter (DMT) superfamily. | HNH endonuclease. | 0.546 |
SDG69052.1 | SDG62505.1 | SAMN05660652_00460 | SAMN05660652_00283 | HNH endonuclease. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.759 |
SDG69052.1 | SDG69014.1 | SAMN05660652_00460 | SAMN05660652_00459 | HNH endonuclease. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.546 |
SDG69052.1 | SDH41582.1 | SAMN05660652_00460 | SAMN05660652_01701 | HNH endonuclease. | dCMP deaminase. | 0.519 |
SDG69052.1 | SDI40338.1 | SAMN05660652_00460 | SAMN05660652_03360 | HNH endonuclease. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.528 |
SDG69052.1 | SDI80522.1 | SAMN05660652_00460 | SAMN05660652_04063 | HNH endonuclease. | AAA-like domain-containing protein. | 0.866 |
SDG69052.1 | dut | SAMN05660652_00460 | SAMN05660652_03483 | HNH endonuclease. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.548 |
SDG69052.1 | folD | SAMN05660652_00460 | SAMN05660652_04032 | HNH endonuclease. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.550 |
SDG69052.1 | purN | SAMN05660652_00460 | SAMN05660652_02820 | HNH endonuclease. | Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.544 |
SDG69052.1 | rsfS | SAMN05660652_00460 | SAMN05660652_00309 | HNH endonuclease. | Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.766 |
SDG69052.1 | tmk | SAMN05660652_00460 | SAMN05660652_01794 | HNH endonuclease. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.550 |
SDH41582.1 | SDG69052.1 | SAMN05660652_01701 | SAMN05660652_00460 | dCMP deaminase. | HNH endonuclease. | 0.519 |
SDH41582.1 | SDI40338.1 | SAMN05660652_01701 | SAMN05660652_03360 | dCMP deaminase. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.597 |
SDH41582.1 | dut | SAMN05660652_01701 | SAMN05660652_03483 | dCMP deaminase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.805 |
SDH41582.1 | tmk | SAMN05660652_01701 | SAMN05660652_01794 | dCMP deaminase. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.731 |
SDI40338.1 | SDG69052.1 | SAMN05660652_03360 | SAMN05660652_00460 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | HNH endonuclease. | 0.528 |
SDI40338.1 | SDH41582.1 | SAMN05660652_03360 | SAMN05660652_01701 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | dCMP deaminase. | 0.597 |
page 1 of 3