STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG69247.1Putative protease. (337 aa)    
Predicted Functional Partners:
SDG69140.1
Collagenase-like protease, PrtC family.
 
 
 0.984
SDG69102.1
Predicted lipid carrier protein YhbT, contains SCP2 domain.
 
  
 0.970
SDI03353.1
Glycosyl transferases group 1.
  
  
 0.628
SDG69287.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.519
SDH56326.1
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.508
SDH21153.1
Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ.
  
    0.501
SDG92117.1
Uncharacterized protein involved in response to NO.
 
    0.472
SDI29755.1
DNA-binding transcriptional regulator, Lrp family.
  
    0.429
SDH02677.1
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
    
  0.413
SDH79581.1
Fructose-bisphosphate aldolase class-II.
    
  0.413
Your Current Organism:
Propionivibrio dicarboxylicus
NCBI taxonomy Id: 83767
Other names: DSM 5885, JCM 12339, JCM 7784, P. dicarboxylicus, strain CreMal1
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