Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG61568.1 | SDG93923.1 | SAMN05660652_00255 | SAMN05660652_00957 | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Hypothetical protein. | 0.407 |
SDG61568.1 | glgA | SAMN05660652_00255 | SAMN05660652_03849 | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.973 |
SDG93890.1 | SDG93923.1 | SAMN05660652_00956 | SAMN05660652_00957 | 2,4-dienoyl-CoA reductase. | Hypothetical protein. | 0.502 |
SDG93923.1 | SDG61568.1 | SAMN05660652_00957 | SAMN05660652_00255 | Hypothetical protein. | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.407 |
SDG93923.1 | SDG93890.1 | SAMN05660652_00957 | SAMN05660652_00956 | Hypothetical protein. | 2,4-dienoyl-CoA reductase. | 0.502 |
SDG93923.1 | SDG93959.1 | SAMN05660652_00957 | SAMN05660652_00958 | Hypothetical protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.517 |
SDG93923.1 | SDH79789.1 | SAMN05660652_00957 | SAMN05660652_02282 | Hypothetical protein. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.441 |
SDG93923.1 | SDI67412.1 | SAMN05660652_00957 | SAMN05660652_03844 | Hypothetical protein. | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.407 |
SDG93923.1 | glgA | SAMN05660652_00957 | SAMN05660652_03849 | Hypothetical protein. | Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.469 |
SDG93959.1 | SDG93923.1 | SAMN05660652_00958 | SAMN05660652_00957 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.517 |
SDH79789.1 | SDG93923.1 | SAMN05660652_02282 | SAMN05660652_00957 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.441 |
SDI67412.1 | SDG93923.1 | SAMN05660652_03844 | SAMN05660652_00957 | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Hypothetical protein. | 0.407 |
SDI67412.1 | glgA | SAMN05660652_03844 | SAMN05660652_03849 | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.975 |
glgA | SDG61568.1 | SAMN05660652_03849 | SAMN05660652_00255 | Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.973 |
glgA | SDG93923.1 | SAMN05660652_03849 | SAMN05660652_00957 | Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Hypothetical protein. | 0.469 |
glgA | SDI67412.1 | SAMN05660652_03849 | SAMN05660652_03844 | Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.975 |