Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG57550.1 | SDG69324.1 | SAMN05660652_00160 | SAMN05660652_00465 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Cyanate permease. | 0.795 |
SDG57550.1 | SDG89418.1 | SAMN05660652_00160 | SAMN05660652_00843 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Planctomycete cytochrome C. | 0.509 |
SDG57550.1 | SDH09614.1 | SAMN05660652_00160 | SAMN05660652_01212 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.509 |
SDG57550.1 | SDH20815.1 | SAMN05660652_00160 | SAMN05660652_01399 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Nitrate reductase gamma subunit. | 0.709 |
SDG57550.1 | SDH20892.1 | SAMN05660652_00160 | SAMN05660652_01401 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Respiratory nitrate reductase beta subunit. | 0.779 |
SDG57550.1 | SDH20925.1 | SAMN05660652_00160 | SAMN05660652_01402 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Respiratory nitrate reductase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.873 |
SDG57550.1 | SDH20964.1 | SAMN05660652_00160 | SAMN05660652_01403 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | MFS transporter, NNP family, nitrate/nitrite transporter. | 0.795 |
SDG57550.1 | SDH96554.1 | SAMN05660652_00160 | SAMN05660652_02604 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | rubredoxin-NAD+ reductase. | 0.994 |
SDG57550.1 | napA | SAMN05660652_00160 | SAMN05660652_01771 | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.765 |
SDG69324.1 | SDG57550.1 | SAMN05660652_00465 | SAMN05660652_00160 | Cyanate permease. | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.795 |
SDG69324.1 | SDG89418.1 | SAMN05660652_00465 | SAMN05660652_00843 | Cyanate permease. | Planctomycete cytochrome C. | 0.510 |
SDG69324.1 | SDH09614.1 | SAMN05660652_00465 | SAMN05660652_01212 | Cyanate permease. | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.510 |
SDG69324.1 | SDH20815.1 | SAMN05660652_00465 | SAMN05660652_01399 | Cyanate permease. | Nitrate reductase gamma subunit. | 0.817 |
SDG69324.1 | SDH20855.1 | SAMN05660652_00465 | SAMN05660652_01400 | Cyanate permease. | Respiratory nitrate reductase chaperone NarJ. | 0.684 |
SDG69324.1 | SDH20892.1 | SAMN05660652_00465 | SAMN05660652_01401 | Cyanate permease. | Respiratory nitrate reductase beta subunit. | 0.844 |
SDG69324.1 | SDH20925.1 | SAMN05660652_00465 | SAMN05660652_01402 | Cyanate permease. | Respiratory nitrate reductase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.891 |
SDG69324.1 | SDH96554.1 | SAMN05660652_00465 | SAMN05660652_02604 | Cyanate permease. | rubredoxin-NAD+ reductase. | 0.681 |
SDG69324.1 | napA | SAMN05660652_00465 | SAMN05660652_01771 | Cyanate permease. | Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.461 |
SDG89418.1 | SDG57550.1 | SAMN05660652_00843 | SAMN05660652_00160 | Planctomycete cytochrome C. | NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.509 |
SDG89418.1 | SDG69324.1 | SAMN05660652_00843 | SAMN05660652_00465 | Planctomycete cytochrome C. | Cyanate permease. | 0.510 |
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