STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH31236.1Aspartate/glutamate racemase. (219 aa)    
Predicted Functional Partners:
SDH31311.1
L-iditol 2-dehydrogenase.
       0.656
SDG76532.1
Dihydropyrimidinase.
    
  0.451
SDG77279.1
Dihydroorotase.
    
  0.451
SDG86013.1
Polysaccharide deacetylase.
    
  0.443
SDH17577.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
    
  0.443
SDI69996.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
    
  0.443
SDI34558.1
Hypothetical protein.
 
     0.401
Your Current Organism:
Propionivibrio dicarboxylicus
NCBI taxonomy Id: 83767
Other names: DSM 5885, JCM 12339, JCM 7784, P. dicarboxylicus, strain CreMal1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.