STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH47280.1TRAP transporter, DctM subunit. (199 aa)    
Predicted Functional Partners:
SDH98359.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  0.736
SDI83434.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.726
SDH16019.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  0.716
SDG67135.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.703
SDI83515.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  0.701
SDI10101.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.659
SDH65402.1
Tripartite ATP-independent transporter solute receptor, DctP family.
  
    0.654
SDI10012.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  0.644
SDI73953.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.644
SDG67104.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  0.640
Your Current Organism:
Propionivibrio dicarboxylicus
NCBI taxonomy Id: 83767
Other names: DSM 5885, JCM 12339, JCM 7784, P. dicarboxylicus, strain CreMal1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.