STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH75494.1MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain. (287 aa)    
Predicted Functional Partners:
SDH75567.1
Predicted Fe-Mo cluster-binding protein, NifX family.
 
  
 0.959
SDG86508.1
Ferredoxin hydrogenase gamma subunit.
   
 0.957
SDH75416.1
Predicted Fe-Mo cluster-binding protein, NifX family.
 
 
 0.946
SDH90404.1
NADH-quinone oxidoreductase subunit E.
   
 0.921
SDG76626.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.919
SDH07159.1
Hypothetical protein.
    
 0.911
SDI61008.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.890
SDH75457.1
MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain.
 
  
0.865
SDH75538.1
tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA.
 
     0.852
SDH75633.1
Predicted DNA-binding protein, UPF0251 family; Belongs to the UPF0251 family.
 
     0.798
Your Current Organism:
Propionivibrio dicarboxylicus
NCBI taxonomy Id: 83767
Other names: DSM 5885, JCM 12339, JCM 7784, P. dicarboxylicus, strain CreMal1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.