STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI19339.1MSHA biogenesis protein MshL. (581 aa)    
Predicted Functional Partners:
SDI19221.1
Hypothetical protein.
 
   
 0.956
SDI19258.1
MSHA biogenesis protein MshJ.
 
  
 0.954
SDI19376.1
MSHA biogenesis protein MshM.
 
  
 0.948
SDH21450.1
Hypothetical protein.
  
 
 0.921
SDI19420.1
MSHA biogenesis protein MshN.
 
     0.892
SDG75107.1
Type III secretion protein R.
  
 
 0.885
SDG75182.1
Type III secretion protein T.
  
 
 0.878
SDG75146.1
Type III secretion protein S.
  
 
 0.871
SDH37928.1
Hypothetical protein.
 
  
 0.818
SDH37783.1
MSHA biogenesis protein MshO.
 
  
 0.811
Your Current Organism:
Propionivibrio dicarboxylicus
NCBI taxonomy Id: 83767
Other names: DSM 5885, JCM 12339, JCM 7784, P. dicarboxylicus, strain CreMal1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.