Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG53671.1 | SDG70235.1 | SAMN05660652_00063 | SAMN05660652_00488 | Hydroxypyruvate isomerase; Belongs to the hyi family. | 5-dehydro-4-deoxy-D-glucarate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.434 |
SDG53671.1 | SDH03768.1 | SAMN05660652_00063 | SAMN05660652_01075 | Hydroxypyruvate isomerase; Belongs to the hyi family. | Tartronate-semialdehyde synthase; Belongs to the TPP enzyme family. | 0.871 |
SDG53671.1 | SDI41540.1 | SAMN05660652_00063 | SAMN05660652_03395 | Hydroxypyruvate isomerase; Belongs to the hyi family. | 3-hydroxyisobutyrate dehydrogenase. | 0.659 |
SDG70235.1 | SDG53671.1 | SAMN05660652_00488 | SAMN05660652_00063 | 5-dehydro-4-deoxy-D-glucarate aldolase; Belongs to the HpcH/HpaI aldolase family. | Hydroxypyruvate isomerase; Belongs to the hyi family. | 0.434 |
SDG70235.1 | SDG70299.1 | SAMN05660652_00488 | SAMN05660652_00490 | 5-dehydro-4-deoxy-D-glucarate aldolase; Belongs to the HpcH/HpaI aldolase family. | Glycerate 2-kinase. | 0.431 |
SDG70235.1 | SDI41540.1 | SAMN05660652_00488 | SAMN05660652_03395 | 5-dehydro-4-deoxy-D-glucarate aldolase; Belongs to the HpcH/HpaI aldolase family. | 3-hydroxyisobutyrate dehydrogenase. | 0.760 |
SDG70235.1 | SDI46676.1 | SAMN05660652_00488 | SAMN05660652_03493 | 5-dehydro-4-deoxy-D-glucarate aldolase; Belongs to the HpcH/HpaI aldolase family. | Hydroxypyruvate isomerase; Belongs to the hyi family. | 0.434 |
SDG70299.1 | SDG70235.1 | SAMN05660652_00490 | SAMN05660652_00488 | Glycerate 2-kinase. | 5-dehydro-4-deoxy-D-glucarate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.431 |
SDG70299.1 | SDI41540.1 | SAMN05660652_00490 | SAMN05660652_03395 | Glycerate 2-kinase. | 3-hydroxyisobutyrate dehydrogenase. | 0.784 |
SDG76626.1 | SDH07159.1 | SAMN05660652_00666 | SAMN05660652_01153 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Hypothetical protein. | 0.999 |
SDG76626.1 | SDH40460.1 | SAMN05660652_00666 | SAMN05660652_01677 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Acetyltransferase. | 0.966 |
SDG76626.1 | SDI41540.1 | SAMN05660652_00666 | SAMN05660652_03395 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 3-hydroxyisobutyrate dehydrogenase. | 0.650 |
SDH03768.1 | SDG53671.1 | SAMN05660652_01075 | SAMN05660652_00063 | Tartronate-semialdehyde synthase; Belongs to the TPP enzyme family. | Hydroxypyruvate isomerase; Belongs to the hyi family. | 0.871 |
SDH03768.1 | SDI41540.1 | SAMN05660652_01075 | SAMN05660652_03395 | Tartronate-semialdehyde synthase; Belongs to the TPP enzyme family. | 3-hydroxyisobutyrate dehydrogenase. | 0.859 |
SDH03768.1 | SDI46676.1 | SAMN05660652_01075 | SAMN05660652_03493 | Tartronate-semialdehyde synthase; Belongs to the TPP enzyme family. | Hydroxypyruvate isomerase; Belongs to the hyi family. | 0.853 |
SDH07159.1 | SDG76626.1 | SAMN05660652_01153 | SAMN05660652_00666 | Hypothetical protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
SDH07159.1 | SDH40460.1 | SAMN05660652_01153 | SAMN05660652_01677 | Hypothetical protein. | Acetyltransferase. | 0.958 |
SDH07159.1 | SDI41540.1 | SAMN05660652_01153 | SAMN05660652_03395 | Hypothetical protein. | 3-hydroxyisobutyrate dehydrogenase. | 0.794 |
SDH40460.1 | SDG76626.1 | SAMN05660652_01677 | SAMN05660652_00666 | Acetyltransferase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.966 |
SDH40460.1 | SDH07159.1 | SAMN05660652_01677 | SAMN05660652_01153 | Acetyltransferase. | Hypothetical protein. | 0.958 |
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