STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI61076.1Hypothetical protein. (246 aa)    
Predicted Functional Partners:
SDG52180.1
Carbohydrate-selective porin, OprB family.
  
     0.746
SDI61008.1
Glutamate synthase (NADPH/NADH) large chain.
       0.638
glmU
Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
       0.630
SDH81551.1
HD-like signal output (HDOD) domain, no enzymatic activity.
  
     0.606
SDI61040.1
Glutamate synthase (NADH) small subunit.
       0.587
SDI19005.1
MSHA pilin protein MshD.
  
     0.586
SDH17796.1
FIST C domain-containing protein.
  
     0.573
SDI19420.1
MSHA biogenesis protein MshN.
  
     0.569
SDG94220.1
HDOD domain-containing protein.
  
     0.567
SDI19046.1
MSHA biogenesis protein MshO.
  
     0.562
Your Current Organism:
Propionivibrio dicarboxylicus
NCBI taxonomy Id: 83767
Other names: DSM 5885, JCM 12339, JCM 7784, P. dicarboxylicus, strain CreMal1
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