STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI66677.1Cytolysin-activating lysine-acyltransferase. (182 aa)    
Predicted Functional Partners:
SDI30454.1
Hypothetical protein.
 
  
 0.831
SDH16582.1
Caspase domain-containing protein.
  
     0.661
SDG96214.1
ATP-binding cassette, subfamily B, HlyB/CyaB.
 
   
 0.569
SDI12717.1
Ca2+-binding protein, RTX toxin-related.
 
  
 0.551
SDI22952.1
Hypothetical protein.
  
     0.549
SDH97770.1
Protein of unknown function.
    
 0.504
SDI75959.1
Protein of unknown function.
  
     0.496
SDG88089.1
poly(beta-D-mannuronate) lyase.
    
 0.474
SDI66620.1
Outer membrane protein.
  
  
 0.452
SDI36657.1
trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.430
Your Current Organism:
Propionivibrio dicarboxylicus
NCBI taxonomy Id: 83767
Other names: DSM 5885, JCM 12339, JCM 7784, P. dicarboxylicus, strain CreMal1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.